Theme_minimal(), theme_classic(), theme_void(). Default value is theme_pubr().Īllowed values include ggplot2 official themes: theme_gray(), theme_bw(), If TRUE, add rectangle underneath theįunction, ggplot2 theme name. This: lect = list(criteria = "`y` > 2 & `y` < 5 & `x` %in%Ī logical value, whether to use ggrepel to avoid overplotting ForĮxample, lect = list(top.up = 10, top.down = 4).Ĭriteria: to filter, for example, by x and y variabes values, use Top.down: to display the labels of the top up/down points. The style, use font.label = list(size = 14, face = "plain"). = list(size = 14, face = "bold", color ="red").
"alic") and the color (e.g.: "red") of labels. font.labelĪ list which can contain the combination of the followingĮlements: the size (e.g.: 14), the style (e.g.: "plain", "bold", "italic", Can be also aĬharacter vector with length = nrow(data). The name of the column containing point labels. When add != "none" and add contains one "mean_*" or "med_*" where "*" = sd, Default value is "pointrange" or "errorbar". "lower_errorbar", "upper_pointrange", "lower_pointrange", "upper_linerange", Allowed values are one ofĬ("pointrange", "linerange", "crossbar", "errorbar", "upper_errorbar", Parameters (color, shape, size, fill, linetype) for theĪrgument 'add' e.g.: add.params = list(color = "red"). "median_q1q3", "median_mad", "median_range" see ?desc_statby for more "mean_ci", "mean_range", "median", "median_iqr", "median_hilow", Allowed values are one or the combination of: "none", addĬharacter vector for adding another plot element (e.g.: dot plot orĮrror bars). orderĬharacter vector specifying the order of items.
removeĬharacter vector specifying which items to remove from the plot. When jitter is added, then outliers willĬharacter vector specifying which items to display. If the notches of two boxes do not overlap, this suggests that the mediansĪre significantly different.
If FALSE (default) make a standard box plot. Numeric value between 0 and 1 specifying box width. Labelled only by variable grouping levels. Labels for panels by omitting variable names in other words panels will be For two grouping variables, you can useįor example panel.labs = list(sex = c("Male", "Female"), rx = c("Obs", For example, panel.labs = list(sex = c("Male", "Female")) specifies panel.labsĪ list of one or two character vectors to modify facet panel Variables for faceting the plot into multiple panels. Numeric value specifying the width of box plot errorĬharacter vector, of length 1 or 2, specifying grouping Use xlab = FALSE toĬharacter vector specifying y axis labels. titleĬharacter vector specifying x axis labels. "lancet", "jco", "ucscgb", "uchicago", "simpsons" and "rickandmorty". Scientific journal palettes from ggsci R package, e.g.: "npg", "aaas", The color palette to be used for coloring or filling by groups.Īllowed values include "grey" for grey color palettes brewer palettes e.g. Labels and the x variable is used as grouping variable. If merge = "flip", then y variables are used as x tick Used only when y isĪ vector containing multiple variables to plot. Used only when y is a vectorĬontaining multiple variables to plot. yĬharacter vector containing one or more variables to plot combine Character string containing the name of x variable.
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